Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.21■■□□□ 1.15
Trim34bJ3QNR8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.2■■□□□ 1.15
Trim34bJ3QNR8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Trim34bJ3QNR8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim34bJ3QNR8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Trim34bJ3QNR8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim34bJ3QNR8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim34bJ3QNR8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Gm7977-201ENSMUST00000193787 748 ntBASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim34bJ3QNR8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim34bJ3QNR8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim34bJ3QNR8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim34bJ3QNR8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Trim34bJ3QNR8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim34bJ3QNR8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trim34bJ3QNR8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Gm21814-202ENSMUST00000203277 873 ntBASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.14■■□□□ 1.13
Trim34bJ3QNR8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim34bJ3QNR8 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.13■■□□□ 1.13
Trim34bJ3QNR8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trim34bJ3QNR8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms