Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cpsf4lE9Q2N0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Gm12441-201ENSMUST00000121806 588 ntBASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4lE9Q2N0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4lE9Q2N0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4lE9Q2N0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4lE9Q2N0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4lE9Q2N0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Gm2559-201ENSMUST00000201323 363 ntBASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4lE9Q2N0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Flg-201ENSMUST00000050758 1488 ntBASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms