Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc28a1E9PXX9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc28a1E9PXX9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc28a1E9PXX9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc28a1E9PXX9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Gm13241-201ENSMUST00000094493 780 ntBASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc28a1E9PXX9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc28a1E9PXX9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms