Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc4a9E9PUP3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Mir2861-201ENSMUST00000175539 82 ntBASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc4a9E9PUP3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc4a9E9PUP3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc4a9E9PUP3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc4a9E9PUP3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc4a9E9PUP3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc4a9E9PUP3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Gm27357-201ENSMUST00000183754 135 ntBASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc4a9E9PUP3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Slc4a9E9PUP3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc4a9E9PUP3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Mir1668-201ENSMUST00000184114 107 ntBASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 AW822252-206ENSMUST00000208904 237 ntBASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.06■□□□□ 0.96
Slc4a9E9PUP3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Slc4a9E9PUP3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc4a9E9PUP3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.03■□□□□ 0.96
Slc4a9E9PUP3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms