Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a6B1AVK5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col4a6B1AVK5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Gm4974-201ENSMUST00000209974 875 ntBASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col4a6B1AVK5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col4a6B1AVK5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Gm13401-201ENSMUST00000117074 291 ntBASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.78■□□□□ 0.6
Col4a6B1AVK5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Col4a6B1AVK5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col4a6B1AVK5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col4a6B1AVK5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Col4a6B1AVK5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms