Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a5A6H584 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a5A6H584 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Col6a5A6H584 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.74□□□□□ -0.21
Col6a5A6H584 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a5A6H584 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a5A6H584 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.73□□□□□ -0.21
Col6a5A6H584 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Gm27702-201ENSMUST00000184512 56 ntBASIC13.73□□□□□ -0.21
Col6a5A6H584 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col6a5A6H584 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Col6a5A6H584 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a5A6H584 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.72□□□□□ -0.21
Col6a5A6H584 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Gm43575-201ENSMUST00000196420 516 ntBASIC13.72□□□□□ -0.21
Col6a5A6H584 Gm7370-201ENSMUST00000219471 767 ntBASIC13.72□□□□□ -0.21
Col6a5A6H584 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col6a5A6H584 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a5A6H584 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Gm11355-201ENSMUST00000121120 306 ntBASIC13.71□□□□□ -0.21
Col6a5A6H584 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.71□□□□□ -0.21
Col6a5A6H584 Gm5186-201ENSMUST00000218781 920 ntBASIC13.71□□□□□ -0.21
Col6a5A6H584 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a5A6H584 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.71□□□□□ -0.22
Col6a5A6H584 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Gm13884-201ENSMUST00000118103 829 ntBASIC13.7□□□□□ -0.22
Col6a5A6H584 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col6a5A6H584 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a5A6H584 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms