Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.8□□□□□ -0.04
Chd6A3KFM7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chd6A3KFM7 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.8□□□□□ -0.04
Chd6A3KFM7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Chd6A3KFM7 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.79□□□□□ -0.04
Chd6A3KFM7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.79□□□□□ -0.04
Chd6A3KFM7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Gm10418-201ENSMUST00000100943 576 ntBASIC14.79□□□□□ -0.04
Chd6A3KFM7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd6A3KFM7 Gm2213-201ENSMUST00000197485 688 ntBASIC14.79□□□□□ -0.04
Chd6A3KFM7 Gm15165-201ENSMUST00000118140 502 ntBASIC14.78□□□□□ -0.04
Chd6A3KFM7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.78□□□□□ -0.04
Chd6A3KFM7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd6A3KFM7 Gm5364-201ENSMUST00000216789 889 ntBASIC14.78□□□□□ -0.04
Chd6A3KFM7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.78□□□□□ -0.04
Chd6A3KFM7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.77□□□□□ -0.04
Chd6A3KFM7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Gm12085-201ENSMUST00000119263 940 ntBASIC14.77□□□□□ -0.05
Chd6A3KFM7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chd6A3KFM7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chd6A3KFM7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chd6A3KFM7 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms