Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Gm7213-201ENSMUST00000215977 950 ntBASIC9.65□□□□□ -0.87
Ubr4A2AN08 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.65□□□□□ -0.87
Ubr4A2AN08 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubr4A2AN08 Gm32699-201ENSMUST00000221728 1988 ntBASIC9.64□□□□□ -0.87
Ubr4A2AN08 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ubr4A2AN08 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.63□□□□□ -0.87
Ubr4A2AN08 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gm11424-201ENSMUST00000121929 829 ntBASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ubr4A2AN08 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.62□□□□□ -0.87
Ubr4A2AN08 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Gm10060-201ENSMUST00000212002 111 ntBASIC9.62□□□□□ -0.87
Ubr4A2AN08 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Gm45328-201ENSMUST00000210942 917 ntBASIC9.62□□□□□ -0.87
Ubr4A2AN08 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ubr4A2AN08 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Gm4995-201ENSMUST00000117247 432 ntBASIC9.61□□□□□ -0.87
Ubr4A2AN08 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.61□□□□□ -0.87
Ubr4A2AN08 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms