Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd5A2A8L1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd5A2A8L1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.21■□□□□ 0.99
Chd5A2A8L1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd5A2A8L1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd5A2A8L1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd5A2A8L1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd5A2A8L1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Gm6659-201ENSMUST00000174752 547 ntBASIC21.19■□□□□ 0.98
Chd5A2A8L1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd5A2A8L1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Gm38027-201ENSMUST00000192315 235 ntBASIC21.18■□□□□ 0.98
Chd5A2A8L1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Gm18032-201ENSMUST00000222541 538 ntBASIC21.18■□□□□ 0.98
Chd5A2A8L1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd5A2A8L1 Gm13401-201ENSMUST00000117074 291 ntBASIC21.17■□□□□ 0.98
Chd5A2A8L1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.17■□□□□ 0.98
Chd5A2A8L1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd5A2A8L1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd5A2A8L1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.16■□□□□ 0.98
Chd5A2A8L1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.16■□□□□ 0.98
Chd5A2A8L1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.15■□□□□ 0.98
Chd5A2A8L1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
Chd5A2A8L1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.15■□□□□ 0.98
Chd5A2A8L1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd5A2A8L1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chd5A2A8L1 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.14■□□□□ 0.98
Chd5A2A8L1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chd5A2A8L1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd5A2A8L1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms