Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbv17A0A140T8P8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv17A0A140T8P8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gm10849-201ENSMUST00000100397 618 ntBASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv17A0A140T8P8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv17A0A140T8P8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms