Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv3-5A0A140T8M6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv3-5A0A140T8M6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Igkv3-5A0A140T8M6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm27454-201ENSMUST00000185090 204 ntBASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.42□□□□□ -0.58
Igkv3-5A0A140T8M6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Gm43173-201ENSMUST00000202246 593 ntBASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Igkv3-5A0A140T8M6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms