Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Dancr-204ENSMUST00000132389 2347 ntBASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav3n-3A0A0G2JEM0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm45102-201ENSMUST00000207427 857 ntBASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Haglr-201ENSMUST00000100000 2085 ntBASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm12922-201ENSMUST00000120626 809 ntBASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms