Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv20A0A0B4J1H5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv20A0A0B4J1H5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Spcs1-204ENSMUST00000226782 949 ntBASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv20A0A0B4J1H5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Golgb1-201ENSMUST00000023534 498 ntBASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv20A0A0B4J1H5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv20A0A0B4J1H5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms