Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv12-2A0A0B4J1H1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm5812-201ENSMUST00000061073 957 ntBASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm15546-201ENSMUST00000122095 826 ntBASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms