Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm12527-201ENSMUST00000117967 564 ntBASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Gm29257-201ENSMUST00000186115 639 ntBASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.02■□□□□ 0.16
Trbv12-1A0A0B4J1H0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm11249-201ENSMUST00000117071 859 ntBASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Fst-202ENSMUST00000223640 2612 ntBASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv12-1A0A0B4J1H0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms