Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv5A0A0B4J1G9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm8969-201ENSMUST00000199694 526 ntBASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv5A0A0B4J1G9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Gm15820-201ENSMUST00000201566 728 ntBASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trbv5A0A0B4J1G9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv5A0A0B4J1G9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv5A0A0B4J1G9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv5A0A0B4J1G9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv5A0A0B4J1G9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trbv5A0A0B4J1G9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms