Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-7A0A075B6B0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm45906-201ENSMUST00000208911 1430 ntBASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm7514-201ENSMUST00000209475 934 ntBASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm10602-201ENSMUST00000098239 609 ntBASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-7A0A075B6B0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-7A0A075B6B0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-7A0A075B6B0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-7A0A075B6B0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms