Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-4A0A075B654 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-4A0A075B654 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav3-4A0A075B654 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.22□□□□□ -0.45
Trav3-4A0A075B654 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms