Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav5-4A0A075B652 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-4A0A075B652 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Gm13534-201ENSMUST00000121169 513 ntBASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-4A0A075B652 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Gm10493-201ENSMUST00000097270 612 ntBASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-4A0A075B652 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms