Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Fst-202ENSMUST00000223640 2612 ntBASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13-2A0A075B649 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Gm43137-201ENSMUST00000198052 594 ntBASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Spcs1-204ENSMUST00000226782 949 ntBASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13-2A0A075B649 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Gm12922-201ENSMUST00000120626 809 ntBASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13-2A0A075B649 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-2A0A075B649 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms