Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Gm13238-201ENSMUST00000117655 780 ntBASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8-1A0A075B641 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Gm5921-201ENSMUST00000075898 882 ntBASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8-1A0A075B641 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8-1A0A075B641 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav8-1A0A075B641 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav8-1A0A075B641 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8-1A0A075B641 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms