Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav4-2A0A075B638 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Spcs1-204ENSMUST00000226782 949 ntBASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav4-2A0A075B638 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav4-2A0A075B638 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Golgb1-201ENSMUST00000023534 498 ntBASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav4-2A0A075B638 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav4-2A0A075B638 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms