Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16d-dv11A0A075B617 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16d-dv11A0A075B617 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav16d-dv11A0A075B617 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm8969-201ENSMUST00000199694 526 ntBASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16d-dv11A0A075B617 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16d-dv11A0A075B617 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16d-dv11A0A075B617 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms