Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv4A0A075B5I2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv4A0A075B5I2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv4A0A075B5I2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv4A0A075B5I2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv4A0A075B5I2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv4A0A075B5I2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv4A0A075B5I2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv4A0A075B5I2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.14■□□□□ 0.5
Trbv4A0A075B5I2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv4A0A075B5I2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms