Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm5456-201ENSMUST00000170706 844 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm20432-201ENSMUST00000173716 250 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm17045-201ENSMUST00000178600 844 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm26587-201ENSMUST00000180795 989 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Mir7005-201ENSMUST00000185089 69 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm19116-201ENSMUST00000218592 642 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm18628-201ENSMUST00000220584 475 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm2178-201ENSMUST00000104927 357 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm11501-201ENSMUST00000118039 581 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm15349-201ENSMUST00000121154 204 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm28846-201ENSMUST00000189161 368 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm43377-201ENSMUST00000201640 455 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm44147-201ENSMUST00000204658 94 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.26□□□□□ -1.41
Lima1Q9ERG0 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm24173-201ENSMUST00000104130 128 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm12040-201ENSMUST00000118357 537 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm5166-201ENSMUST00000121332 573 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm4997-201ENSMUST00000154056 360 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm8715-201ENSMUST00000162728 531 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm9529-201ENSMUST00000177598 579 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Mir6348-201ENSMUST00000183804 120 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm28620-201ENSMUST00000190463 439 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm20926-201ENSMUST00000194457 696 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm37526-201ENSMUST00000194640 619 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm3549-201ENSMUST00000203873 794 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lima1Q9ERG0 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.25□□□□□ -1.41
Lima1Q9ERG0 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms