Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26487-201ENSMUST00000158022 94 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm18415-201ENSMUST00000177464 647 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm28117-201ENSMUST00000188472 371 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm9114-201ENSMUST00000188558 997 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm9057-201ENSMUST00000198791 296 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm43141-201ENSMUST00000199695 274 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm45122-201ENSMUST00000206376 784 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC159297.1-201ENSMUST00000218689 290 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm5655-201ENSMUST00000221078 901 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC154335.1-201ENSMUST00000224744 395 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm25587-201ENSMUST00000082498 166 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm37303-201ENSMUST00000194202 1559 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 AC122408.2-201ENSMUST00000217901 1391 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm23527-201ENSMUST00000104570 130 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm14070-201ENSMUST00000120773 428 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm13462-201ENSMUST00000121472 961 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm23027-201ENSMUST00000158771 158 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm9672-201ENSMUST00000166437 425 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28739-201ENSMUST00000185415 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28219-201ENSMUST00000185452 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28542-201ENSMUST00000185545 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28303-201ENSMUST00000185642 747 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29244-201ENSMUST00000185825 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29437-201ENSMUST00000185865 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29412-201ENSMUST00000185869 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28910-201ENSMUST00000185921 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28812-201ENSMUST00000185963 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29468-201ENSMUST00000185978 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28854-201ENSMUST00000186218 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28636-201ENSMUST00000186353 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28452-201ENSMUST00000186623 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29298-201ENSMUST00000186704 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28185-201ENSMUST00000186815 694 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28227-201ENSMUST00000186862 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28796-201ENSMUST00000186905 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29659-201ENSMUST00000187063 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28473-201ENSMUST00000187325 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28682-201ENSMUST00000187430 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28738-201ENSMUST00000187480 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28949-201ENSMUST00000187805 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm28773-201ENSMUST00000187925 696 ntBASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Ddx56Q9D0R4 Gm29319-201ENSMUST00000188060 696 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms