Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm22374-201ENSMUST00000104583 132 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm12842-201ENSMUST00000117298 476 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm9506-201ENSMUST00000118516 320 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Mir1903-201ENSMUST00000122574 80 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm16248-201ENSMUST00000124238 243 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm24176-201ENSMUST00000158928 121 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm11107-201ENSMUST00000165414 505 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm4152-201ENSMUST00000172675 259 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm23617-201ENSMUST00000175410 95 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm29197-201ENSMUST00000185922 702 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm18601-201ENSMUST00000220831 634 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm18618-201ENSMUST00000222211 473 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm7252-201ENSMUST00000223284 456 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 AW822073-201ENSMUST00000075305 555 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm24621-201ENSMUST00000082679 140 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
Smc1aQ9CU62 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Smc1aQ9CU62 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.27□□□□□ -1.24
Smc1aQ9CU62 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm11920-201ENSMUST00000118491 563 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm15311-201ENSMUST00000119682 282 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm15305-201ENSMUST00000120354 288 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm19185-201ENSMUST00000196365 643 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm43157-201ENSMUST00000198223 412 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm45070-201ENSMUST00000208100 246 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Thap6-201ENSMUST00000191860 3151 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.27□□□□□ -1.25
Smc1aQ9CU62 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms