Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm28567-201ENSMUST00000190270 693 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm37044-201ENSMUST00000193531 693 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm38369-201ENSMUST00000195101 693 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm2053-201ENSMUST00000195671 631 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm12399-201ENSMUST00000121475 446 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm6068-201ENSMUST00000222270 387 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm13006-201ENSMUST00000118683 214 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm12074-201ENSMUST00000120189 219 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm42720-201ENSMUST00000196813 300 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm44048-201ENSMUST00000204531 361 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm45739-201ENSMUST00000213094 388 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms