Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm18012-201ENSMUST00000204558 773 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm44112-201ENSMUST00000204787 372 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm20136-201ENSMUST00000207501 891 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Mir106b-201ENSMUST00000083580 82 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm2178-201ENSMUST00000104927 357 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm13732-201ENSMUST00000117753 535 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm12174-201ENSMUST00000119853 813 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm23632-201ENSMUST00000175289 125 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm27295-201ENSMUST00000184264 153 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm18352-201ENSMUST00000189113 902 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm38291-201ENSMUST00000193671 259 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm9419-201ENSMUST00000200672 567 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.18□□□□□ -1.42
Lsm1Q8VC85 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Mir688-201ENSMUST00000102055 75 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm13438-201ENSMUST00000120100 573 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm6142-201ENSMUST00000120290 325 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm5166-201ENSMUST00000121332 573 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm12094-201ENSMUST00000121781 472 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Mir7033-201ENSMUST00000184259 81 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm37511-201ENSMUST00000192901 294 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms