Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.47□□□□□ -1.37
Clrn1Q8K445 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Clrn1Q8K445 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Clrn1Q8K445 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Mir546-201ENSMUST00000102105 121 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm24519-201ENSMUST00000104507 132 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm11903-201ENSMUST00000118958 727 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm14103-201ENSMUST00000119075 366 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm15754-201ENSMUST00000119191 478 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm13440-201ENSMUST00000121665 496 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm25839-201ENSMUST00000158921 103 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm16026-202ENSMUST00000159695 772 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm19807-201ENSMUST00000173971 667 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Mir8120-201ENSMUST00000185035 139 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm28428-201ENSMUST00000188886 697 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm28586-201ENSMUST00000189857 456 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm42673-201ENSMUST00000202676 337 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm6064-201ENSMUST00000203999 454 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm45382-201ENSMUST00000210607 151 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm45725-201ENSMUST00000212962 337 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm18892-201ENSMUST00000217628 881 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm6841-201ENSMUST00000220602 598 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm25739-201ENSMUST00000082886 107 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm24411-201ENSMUST00000083428 131 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.46□□□□□ -1.38
Clrn1Q8K445 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Clrn1Q8K445 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm15129-201ENSMUST00000119673 279 ntBASIC6.45□□□□□ -1.38
Clrn1Q8K445 Gm14900-201ENSMUST00000120304 733 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms