Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm8061-201ENSMUST00000122380 350 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm18191-201ENSMUST00000174624 824 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm19791-201ENSMUST00000180398 859 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm37187-201ENSMUST00000193425 341 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm2996-201ENSMUST00000211398 537 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm18592-201ENSMUST00000221529 276 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm22372-201ENSMUST00000104589 136 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm22952-201ENSMUST00000116720 120 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm15616-201ENSMUST00000118662 375 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm13366-201ENSMUST00000122198 970 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm22588-201ENSMUST00000157510 140 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm23995-201ENSMUST00000158060 129 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm2539-203ENSMUST00000181352 746 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm26923-201ENSMUST00000182615 996 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm28877-201ENSMUST00000191349 604 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm42886-201ENSMUST00000199214 466 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm19885-201ENSMUST00000212853 343 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.4□□□□□ -1.22
Syne4Q8CII8 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.4□□□□□ -1.22
Syne4Q8CII8 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Syne4Q8CII8 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.4□□□□□ -1.23
Syne4Q8CII8 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
Syne4Q8CII8 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Syne4Q8CII8 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Syne4Q8CII8 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.39□□□□□ -1.23
Syne4Q8CII8 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Syne4Q8CII8 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Syne4Q8CII8 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.39□□□□□ -1.23
Syne4Q8CII8 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms