Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm38574-201ENSMUST00000211855 640 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 AC158142.3-201ENSMUST00000226230 675 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm4660-201ENSMUST00000131499 403 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm23673-201ENSMUST00000157474 298 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm6726-201ENSMUST00000172786 681 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm29385-201ENSMUST00000186831 363 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm19088-201ENSMUST00000198800 566 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm43762-201ENSMUST00000201521 295 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm30708-201ENSMUST00000202183 312 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Cma2-202ENSMUST00000228263 857 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Vps53Q8CCB4 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.66□□□□□ -1.18
Vps53Q8CCB4 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm23748-201ENSMUST00000104227 131 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm8534-201ENSMUST00000118553 766 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm12630-201ENSMUST00000121575 784 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm25435-201ENSMUST00000158277 267 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm11107-201ENSMUST00000165414 505 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm9027-201ENSMUST00000165914 661 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm27507-201ENSMUST00000184199 93 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm27601-201ENSMUST00000184794 127 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm18799-201ENSMUST00000189104 913 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm18952-201ENSMUST00000194471 846 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm45122-201ENSMUST00000206376 784 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms