Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm37589-201ENSMUST00000193609 3994 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm13566-201ENSMUST00000117428 1142 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm13890-201ENSMUST00000117578 390 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm15096-201ENSMUST00000121918 878 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm29778-201ENSMUST00000201667 466 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 AC116319.2-201ENSMUST00000228159 984 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm24041-201ENSMUST00000083115 156 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Mir375-201ENSMUST00000083682 64 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Gm43627-201ENSMUST00000197119 2299 ntBASIC9.01□□□□□ -0.97
Usp54Q8BL06 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Usp54Q8BL06 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Usp54Q8BL06 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC9□□□□□ -0.97
Usp54Q8BL06 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Usp54Q8BL06 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Gm13818-201ENSMUST00000119441 511 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Gm14331-201ENSMUST00000120396 409 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC9□□□□□ -0.97
Usp54Q8BL06 Gm8929-201ENSMUST00000197781 1132 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Gm17988-201ENSMUST00000208796 535 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Gm7557-201ENSMUST00000221935 865 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 n-R5s36-201ENSMUST00000082998 119 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 n-R5s89-201ENSMUST00000083532 104 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Usp54Q8BL06 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC9□□□□□ -0.97
Usp54Q8BL06 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 AC158537.1-201ENSMUST00000224637 1711 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Gm45457-201ENSMUST00000209931 3089 ntBASIC9□□□□□ -0.97
Usp54Q8BL06 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9□□□□□ -0.97
Usp54Q8BL06 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm23280-201ENSMUST00000157905 139 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm27004-201ENSMUST00000183300 727 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm18348-201ENSMUST00000191227 820 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC112956.1-201ENSMUST00000213563 492 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC134254.2-201ENSMUST00000221262 170 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC107711.2-203ENSMUST00000227827 762 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm13533-201ENSMUST00000121104 177 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC124826.1-201ENSMUST00000221651 325 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC165260.1-201ENSMUST00000224127 683 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.99□□□□□ -0.97
Usp54Q8BL06 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp54Q8BL06 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms