Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18849-201ENSMUST00000189861 560 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm43089-201ENSMUST00000199162 275 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm2398-201ENSMUST00000218347 883 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm18618-201ENSMUST00000222211 473 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm5436-201ENSMUST00000058103 643 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm7808-201ENSMUST00000082002 387 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm24621-201ENSMUST00000082679 140 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc40Q8BI79 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm13983-201ENSMUST00000118018 865 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm11318-201ENSMUST00000118640 961 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm6884-201ENSMUST00000119318 615 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm11498-201ENSMUST00000120660 949 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm3585-201ENSMUST00000173438 875 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Mir6337-201ENSMUST00000184194 105 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Mir7033-201ENSMUST00000184259 81 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm27970-201ENSMUST00000184854 407 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm29141-201ENSMUST00000190357 882 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm2767-201ENSMUST00000209582 473 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm35619-201ENSMUST00000222548 600 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.8□□□□□ -1.32
Ccdc40Q8BI79 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms