Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rif1Q6PR54 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rif1Q6PR54 Gm37326-201ENSMUST00000192828 3071 ntBASIC5.59□□□□□ -1.51
Rif1Q6PR54 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm43766-201ENSMUST00000200590 5417 ntBASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.59□□□□□ -1.52
Rif1Q6PR54 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm5752-201ENSMUST00000117771 594 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm8595-201ENSMUST00000118250 630 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm25152-201ENSMUST00000157117 114 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm24295-201ENSMUST00000158298 131 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm25605-201ENSMUST00000158364 124 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm17997-201ENSMUST00000211801 840 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm18442-201ENSMUST00000220925 639 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm5457-201ENSMUST00000022260 333 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Dgkh-206ENSMUST00000228362 3308 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm14563-201ENSMUST00000120571 354 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm14251-201ENSMUST00000122133 279 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm25013-201ENSMUST00000158402 128 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm4613-201ENSMUST00000165488 276 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm28958-201ENSMUST00000185864 703 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm17824-201ENSMUST00000197690 805 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm44683-201ENSMUST00000209088 484 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.58□□□□□ -1.52
Rif1Q6PR54 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Rif1Q6PR54 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm11443-201ENSMUST00000118790 479 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm25717-201ENSMUST00000158631 353 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm8920-201ENSMUST00000196153 924 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm5853-201ENSMUST00000197183 632 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm9237-201ENSMUST00000221499 548 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 AC122309.1-201ENSMUST00000226945 421 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm38262-201ENSMUST00000194760 1382 ntBASIC5.57□□□□□ -1.52
Rif1Q6PR54 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rif1Q6PR54 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms