Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm28008-201ENSMUST00000184021 186 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm42753-201ENSMUST00000196718 1268 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm3549-201ENSMUST00000203873 794 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm19182-201ENSMUST00000207139 577 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 AC174678.3-201ENSMUST00000227568 362 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 CT009734.1-201ENSMUST00000227657 1687 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm22671-201ENSMUST00000104420 134 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.53□□□□□ -0.88
Clcn1Q64347 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm8550-201ENSMUST00000161621 653 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm8609-201ENSMUST00000182967 998 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm27684-201ENSMUST00000183778 80 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm18727-201ENSMUST00000185981 553 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm8004-201ENSMUST00000187782 617 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm28803-201ENSMUST00000190385 764 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm37219-201ENSMUST00000192036 926 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm37260-201ENSMUST00000193748 1251 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm43287-201ENSMUST00000197747 600 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm8182-201ENSMUST00000197863 769 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm5001-201ENSMUST00000204361 331 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm18860-201ENSMUST00000212029 764 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 AC156504.1-201ENSMUST00000214608 157 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC9.53□□□□□ -0.88
Clcn1Q64347 AC159472.1-201ENSMUST00000218178 463 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 CT009527.2-201ENSMUST00000225386 606 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 CT030194.2-201ENSMUST00000225752 379 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 AC154727.1-201ENSMUST00000226537 499 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm23054-201ENSMUST00000082804 162 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm24707-201ENSMUST00000082812 107 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm18491-201ENSMUST00000192492 1594 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm19801-201ENSMUST00000218231 1882 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 AC190403.1-201ENSMUST00000224515 1325 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm43398-201ENSMUST00000196584 2742 ntBASIC9.53□□□□□ -0.88
Clcn1Q64347 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.53□□□□□ -0.88
Clcn1Q64347 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.53□□□□□ -0.88
Clcn1Q64347 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Clcn1Q64347 Gm44178-201ENSMUST00000205229 2930 ntBASIC9.52□□□□□ -0.88
Clcn1Q64347 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.88
Clcn1Q64347 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC9.52□□□□□ -0.88
Clcn1Q64347 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms