Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm23945-201ENSMUST00000179609 92 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm29464-201ENSMUST00000187692 513 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm37103-201ENSMUST00000191830 115 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm37177-201ENSMUST00000193768 417 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm7626-201ENSMUST00000195801 353 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm43233-201ENSMUST00000200491 616 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 BC049739-201ENSMUST00000202626 660 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm18290-201ENSMUST00000202900 844 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm7780-201ENSMUST00000214787 406 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm5055-201ENSMUST00000215697 581 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm19212-201ENSMUST00000216642 862 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Vps54Q5SPW0 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Vps54Q5SPW0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm14356-201ENSMUST00000118322 869 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm11198-201ENSMUST00000119771 974 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm12152-201ENSMUST00000122465 684 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm22701-201ENSMUST00000175371 291 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Mir6989-201ENSMUST00000184812 65 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm18700-201ENSMUST00000185791 553 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm37511-201ENSMUST00000192901 294 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm5694-201ENSMUST00000195648 641 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm23011-202ENSMUST00000197855 275 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps54Q5SPW0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm12874-201ENSMUST00000117190 913 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm12442-201ENSMUST00000118372 338 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm15618-201ENSMUST00000121610 452 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm5809-201ENSMUST00000121854 529 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm44075-201ENSMUST00000204208 216 ntBASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps54Q5SPW0 Thoc7-209ENSMUST00000225325 765 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms