Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Syne3Q4FZC9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Syne3Q4FZC9 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Syne3Q4FZC9 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne3Q4FZC9 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.07□□□□□ -1.28
Syne3Q4FZC9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Mir708-201ENSMUST00000102189 109 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm23897-201ENSMUST00000158110 158 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm24369-201ENSMUST00000175387 96 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm29197-201ENSMUST00000185922 702 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm38330-201ENSMUST00000192743 959 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm42824-201ENSMUST00000199361 247 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm43478-201ENSMUST00000200381 292 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm9038-201ENSMUST00000203400 604 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm43974-201ENSMUST00000205080 684 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm46203-201ENSMUST00000218130 478 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm25587-201ENSMUST00000082498 166 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Mir106b-201ENSMUST00000083580 82 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne3Q4FZC9 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm11501-201ENSMUST00000118039 581 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm14301-201ENSMUST00000120181 324 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm14369-201ENSMUST00000121355 285 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm22636-201ENSMUST00000158142 275 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm16147-201ENSMUST00000162143 373 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm23633-201ENSMUST00000175293 119 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm25617-201ENSMUST00000179548 133 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Mir6337-201ENSMUST00000184194 105 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm27507-201ENSMUST00000184199 93 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm28925-201ENSMUST00000188586 168 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Gm25617-202ENSMUST00000198387 132 ntBASIC7.05□□□□□ -1.28
Syne3Q4FZC9 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms