Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm14870-201ENSMUST00000118414 156 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm12565-201ENSMUST00000119004 649 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm14054-201ENSMUST00000120744 704 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm25374-201ENSMUST00000158158 101 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm7266-201ENSMUST00000187999 405 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm9710-201ENSMUST00000198053 499 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm7499-201ENSMUST00000210423 813 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.65□□□□□ -1.51
Nkx3-1P97436 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nkx3-1P97436 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm13702-201ENSMUST00000118542 825 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm7212-201ENSMUST00000120817 348 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm13578-201ENSMUST00000120849 590 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm14038-201ENSMUST00000121500 807 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm12630-201ENSMUST00000121575 784 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm24687-201ENSMUST00000157758 241 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm37380-201ENSMUST00000193752 397 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm19212-201ENSMUST00000216642 862 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms