Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm20778-201ENSMUST00000178524 627 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm25891-201ENSMUST00000180050 132 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm4332-201ENSMUST00000196114 346 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx2P43241 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.2□□□□□ -1.42
Cdx2P43241 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx2P43241 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Cdx2P43241 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx2P43241 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Cdx2P43241 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx2P43241 Mir708-201ENSMUST00000102189 109 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm26067-201ENSMUST00000103789 110 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm12229-201ENSMUST00000120487 468 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm23539-201ENSMUST00000157537 224 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm5947-201ENSMUST00000179156 714 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm5645-201ENSMUST00000179597 714 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm42799-201ENSMUST00000201331 328 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.19□□□□□ -1.42
Cdx2P43241 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx2P43241 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx2P43241 Zfp850-201ENSMUST00000099111 941 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdx2P43241 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.19□□□□□ -1.42
Cdx2P43241 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cdx2P43241 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx2P43241 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.18□□□□□ -1.42
Cdx2P43241 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.18□□□□□ -1.42
Cdx2P43241 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.18□□□□□ -1.42
Cdx2P43241 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx2P43241 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx2P43241 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx2P43241 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.18□□□□□ -1.42
Cdx2P43241 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx2P43241 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.18□□□□□ -1.42
Cdx2P43241 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms