Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm13311-201ENSMUST00000117863 379 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Sdc1P18828 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm18833-201ENSMUST00000173218 862 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm7031-201ENSMUST00000173709 919 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm24756-201ENSMUST00000177002 96 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm5920-201ENSMUST00000187390 853 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm4322-201ENSMUST00000191094 336 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm29435-201ENSMUST00000191310 689 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm44582-201ENSMUST00000209125 445 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.13□□□□□ -1.59
Sdc1P18828 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm10307-201ENSMUST00000189839 1337 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.13□□□□□ -1.59
Sdc1P18828 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Sdc1P18828 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.13□□□□□ -1.59
Sdc1P18828 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Sdc1P18828 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Sdc1P18828 Zfp389-201ENSMUST00000118425 675 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm8421-201ENSMUST00000119439 305 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm25969-201ENSMUST00000157166 132 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm11107-201ENSMUST00000165414 505 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm7200-201ENSMUST00000188426 1163 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm29592-201ENSMUST00000189434 370 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm43590-201ENSMUST00000195987 387 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm34144-201ENSMUST00000197039 259 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm43743-202ENSMUST00000198353 491 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm18131-201ENSMUST00000199241 449 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm44108-201ENSMUST00000203525 422 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.12□□□□□ -1.59
Sdc1P18828 AC151901.1-201ENSMUST00000218274 180 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Gm35619-201ENSMUST00000222548 600 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AC154506.2-201ENSMUST00000225481 1276 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.12□□□□□ -1.59
Sdc1P18828 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Sdc1P18828 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.12□□□□□ -1.59
Sdc1P18828 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sdc1P18828 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms