Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm15715-201ENSMUST00000118032 283 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gm14115-201ENSMUST00000119242 482 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm42652-201ENSMUST00000199073 614 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm4012-201ENSMUST00000221504 581 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Col1a1P11087 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.5□□□□□ -1.21
Col1a1P11087 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col1a1P11087 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Col1a1P11087 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm25919-201ENSMUST00000104271 132 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Mir466f-4-201ENSMUST00000116930 121 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm14294-201ENSMUST00000119749 751 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm13998-201ENSMUST00000120952 335 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm8761-201ENSMUST00000121507 955 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col1a1P11087 Mir5112-201ENSMUST00000174897 60 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.49□□□□□ -1.21
Col1a1P11087 Mir6362-201ENSMUST00000184329 107 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm21728-201ENSMUST00000188442 695 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm21889-201ENSMUST00000188487 695 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20932-201ENSMUST00000189115 694 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm21920-201ENSMUST00000190042 695 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm9710-201ENSMUST00000198053 499 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm2225-201ENSMUST00000209570 377 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm36501-201ENSMUST00000221857 745 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col1a1P11087 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col1a1P11087 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 AC112142.1-203ENSMUST00000228670 2472 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.49□□□□□ -1.21
Col1a1P11087 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
Col1a1P11087 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm23669-201ENSMUST00000157470 128 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm19840-201ENSMUST00000169624 882 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.49□□□□□ -1.21
Col1a1P11087 Igkv3-8-201ENSMUST00000197635 339 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm19182-201ENSMUST00000207139 577 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Gm18405-201ENSMUST00000220743 511 ntBASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col1a1P11087 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms