Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm25057-201ENSMUST00000157366 88 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm26086-201ENSMUST00000157902 263 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm18348-201ENSMUST00000191227 820 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm4374-201ENSMUST00000204929 424 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm5830-201ENSMUST00000049117 443 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm14158-201ENSMUST00000118409 308 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm15233-201ENSMUST00000118747 400 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm14098-201ENSMUST00000119295 623 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm24741-201ENSMUST00000158857 106 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm3008-201ENSMUST00000160566 571 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Mir5125-201ENSMUST00000175240 79 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Mir6362-201ENSMUST00000184329 107 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm2950-201ENSMUST00000185530 520 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm43222-201ENSMUST00000199013 603 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm10095-201ENSMUST00000222765 483 ntBASIC6.58□□□□□ -1.36
Col4a6B1AVK5 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm10764-202ENSMUST00000220397 2335 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm14115-201ENSMUST00000119242 482 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm11498-201ENSMUST00000120660 949 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm11545-201ENSMUST00000146507 375 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm3650-201ENSMUST00000180600 747 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm27004-201ENSMUST00000183300 727 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm37358-201ENSMUST00000195492 479 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm36501-201ENSMUST00000221857 745 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms