Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm23891-201ENSMUST00000158114 138 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm2539-203ENSMUST00000181352 746 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm29197-201ENSMUST00000185922 702 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm7626-201ENSMUST00000195801 353 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm43212-201ENSMUST00000198208 394 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Tcf24-201ENSMUST00000097824 2639 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm11105-201ENSMUST00000112781 478 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm13451-201ENSMUST00000117649 592 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Mir1932-201ENSMUST00000157390 90 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm22599-201ENSMUST00000157597 132 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm3008-201ENSMUST00000160566 571 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm21772-201ENSMUST00000169213 478 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm17126-201ENSMUST00000172276 523 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Mir6903-201ENSMUST00000183597 88 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm27409-201ENSMUST00000184727 80 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm18405-201ENSMUST00000220743 511 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a4A2AX52 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.42□□□□□ -1.54
Col6a4A2AX52 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm22103-201ENSMUST00000116733 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm26475-201ENSMUST00000116769 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm23620-201ENSMUST00000116812 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm25042-201ENSMUST00000116856 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm25540-201ENSMUST00000116880 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm14237-201ENSMUST00000122080 430 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm23550-201ENSMUST00000179003 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm25123-201ENSMUST00000179154 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm25353-201ENSMUST00000179366 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm22992-201ENSMUST00000179496 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm24957-201ENSMUST00000179604 132 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm25892-201ENSMUST00000179867 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm24092-201ENSMUST00000180257 121 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm8192-201ENSMUST00000182196 958 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm38840-201ENSMUST00000204716 843 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm17950-201ENSMUST00000214617 646 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.41□□□□□ -1.54
Col6a4A2AX52 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a4A2AX52 Gm10744-201ENSMUST00000220184 2706 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms