Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm23748-201ENSMUST00000104227 131 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm16073-201ENSMUST00000116032 517 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm15715-201ENSMUST00000118032 283 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm8534-201ENSMUST00000118553 766 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm13222-201ENSMUST00000119638 138 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm4992-201ENSMUST00000120256 768 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm15786-201ENSMUST00000121079 450 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm22523-201ENSMUST00000158696 100 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Mir5617-201ENSMUST00000176786 57 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm43849-201ENSMUST00000201086 215 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim3Q9R1R2 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm14659-201ENSMUST00000117667 843 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm12189-201ENSMUST00000119779 912 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm6726-201ENSMUST00000172786 681 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm24300-201ENSMUST00000177809 109 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm24017-201ENSMUST00000178726 109 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm23952-201ENSMUST00000179380 109 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm38068-201ENSMUST00000192546 540 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm37439-201ENSMUST00000193150 856 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm5050-201ENSMUST00000197164 775 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm7452-201ENSMUST00000200764 788 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm9367-201ENSMUST00000205703 546 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms