Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Gm38090-201ENSMUST00000195733 1942 ntBASIC7.15□□□□□ -1.27
Trim39Q9ESN2 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
Trim39Q9ESN2 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm12520-201ENSMUST00000117493 316 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm13252-201ENSMUST00000119355 321 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm11876-201ENSMUST00000120002 269 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm14414-201ENSMUST00000120833 573 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm11385-201ENSMUST00000121513 570 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm12045-201ENSMUST00000122122 573 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm14328-201ENSMUST00000122178 408 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm9498-201ENSMUST00000140849 291 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm25219-201ENSMUST00000157545 330 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm17154-201ENSMUST00000165748 431 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm7346-201ENSMUST00000169661 476 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm29462-201ENSMUST00000191458 288 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm43523-201ENSMUST00000197397 2878 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm42861-201ENSMUST00000199596 634 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm5305-201ENSMUST00000204010 746 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm44561-201ENSMUST00000208869 264 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm6362-201ENSMUST00000217686 836 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 AC124399.1-201ENSMUST00000218334 590 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm4052-201ENSMUST00000220890 451 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 AC119573.1-201ENSMUST00000227960 757 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm23378-201ENSMUST00000082942 107 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm25403-201ENSMUST00000082971 143 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Gm24917-201ENSMUST00000083935 104 ntBASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim39Q9ESN2 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim39Q9ESN2 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms