Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clp1Q99LI9 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm26144-201ENSMUST00000104475 132 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm13459-201ENSMUST00000121558 646 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm22223-201ENSMUST00000157360 125 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm4202-201ENSMUST00000169025 733 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm24080-201ENSMUST00000175178 232 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm21542-201ENSMUST00000182307 993 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm29073-201ENSMUST00000185563 664 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm29165-201ENSMUST00000190655 664 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm29211-201ENSMUST00000191470 664 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm37620-201ENSMUST00000192910 501 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm18864-201ENSMUST00000194518 1051 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm20128-201ENSMUST00000196189 417 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm24826-202ENSMUST00000197298 216 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm2754-201ENSMUST00000223383 589 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 AC162857.1-201ENSMUST00000226614 400 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm3089-201ENSMUST00000200804 1395 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm3302-201ENSMUST00000201462 1395 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Clp1Q99LI9 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.78□□□□□ -1.16
Clp1Q99LI9 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Clp1Q99LI9 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Clp1Q99LI9 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.77□□□□□ -1.17
Clp1Q99LI9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.77□□□□□ -1.17
Clp1Q99LI9 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm25498-201ENSMUST00000104424 129 ntBASIC7.77□□□□□ -1.17
Clp1Q99LI9 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms