Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm22005-201ENSMUST00000082795 141 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm38128-201ENSMUST00000192085 3250 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm24473-201ENSMUST00000104483 131 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm11833-201ENSMUST00000118393 853 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm13357-201ENSMUST00000120528 537 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm25342-201ENSMUST00000157459 122 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm21728-201ENSMUST00000188442 695 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm21889-201ENSMUST00000188487 695 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20932-201ENSMUST00000189115 694 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm21920-201ENSMUST00000190042 695 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm8480-201ENSMUST00000190350 698 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm37684-201ENSMUST00000192779 355 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm19185-201ENSMUST00000196365 643 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20239-201ENSMUST00000196610 982 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm43089-201ENSMUST00000199162 275 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm44213-201ENSMUST00000204977 703 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm44237-201ENSMUST00000205183 936 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm18914-201ENSMUST00000214625 616 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm19212-201ENSMUST00000216642 862 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm8607-201ENSMUST00000221864 431 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 AC154441.1-201ENSMUST00000223653 1006 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Vps53Q8CCB4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Vps53Q8CCB4 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms