Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm18752-201ENSMUST00000192876 608 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm42652-201ENSMUST00000199073 614 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm44652-201ENSMUST00000208648 2854 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm14870-201ENSMUST00000118414 156 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm23259-201ENSMUST00000158318 303 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm9529-201ENSMUST00000177598 579 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm36935-201ENSMUST00000192526 292 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm37070-201ENSMUST00000193272 460 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm37358-201ENSMUST00000195492 479 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm45724-201ENSMUST00000213031 420 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm45739-201ENSMUST00000213094 388 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a6Q8C6K9 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm36262-201ENSMUST00000223274 499 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm15158-201ENSMUST00000120577 570 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm14237-201ENSMUST00000122080 430 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm27355-201ENSMUST00000185045 128 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms