Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Trim47Q8C0E3 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim47Q8C0E3 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.34□□□□□ -1.08
Trim47Q8C0E3 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm23942-201ENSMUST00000101956 107 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm22470-201ENSMUST00000104117 130 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm16221-201ENSMUST00000117331 393 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm15209-201ENSMUST00000117703 400 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm16056-201ENSMUST00000119293 135 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm13928-201ENSMUST00000120326 1732 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm14489-201ENSMUST00000120868 901 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm22392-201ENSMUST00000177971 107 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm21638-201ENSMUST00000179473 836 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm21729-201ENSMUST00000180058 664 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm21853-201ENSMUST00000180071 664 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Dalir-201ENSMUST00000188773 2170 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm29495-201ENSMUST00000189319 664 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm29214-201ENSMUST00000190216 570 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm44227-201ENSMUST00000203576 241 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm4574-201ENSMUST00000207804 542 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 CT030194.2-201ENSMUST00000225752 379 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm36927-201ENSMUST00000192504 1841 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim47Q8C0E3 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms